{"entity":{"id":"uberon","kind":"term","name":"Uberon anatomy ontology and the Cell Ontology","aka":["Uberon","UBERON","Uberon anatomy ontology","Cell Ontology","CL ontology","CL term","cell type ontology"],"tldr":"Uberon names anatomical structures (organs, tissues) and the Cell Ontology names cell types, each with a code, so that a tissue label or a cell-type annotation means the same thing across datasets.","summary":"Uberon is a comparative anatomy ontology of animal structures such as lungs, muscles and bones, connected by relations such as part-of and develops-from (Wikipedia); the Cell Ontology captures the diversity of animal cell types and its identifiers annotate data at the cell-type level, for example in single-cell atlases (Wikipedia). CELLxGENE requires both, and OnCo's body-region and organ mappings play the same role informally.","asOf":"2026-09-24","wikipedia":"https://en.wikipedia.org/wiki/Uberon","links":[{"label":"Wikipedia: Cell Ontology","url":"https://en.wikipedia.org/wiki/Cell_Ontology"},{"label":"OBO Foundry: Uberon","url":"https://obofoundry.org/ontology/uberon.html"},{"label":"OBO Foundry: Cell Ontology","url":"https://obofoundry.org/ontology/cl.html"},{"label":"Wikipedia","url":"https://en.wikipedia.org/wiki/Uberon"}],"tags":["cansim-terms"],"related":["cellxgene-hca","cancer-ai-vocabulary"],"cancers":[],"sections":[],"technologies":[],"targets":[],"drugs":[],"companies":[],"institutions":[],"pathways":[],"terms":["mondo","hpo","single-cell-rna-seq"],"trials":[],"people":[],"bottlenecks":[],"keyPapers":[],"journals":[],"dependsOn":[],"notes":["Listed in the CanSim terms map 1.0.0 (docs/onco/terms.json, generated 2026-09-24), CC BY 4.0, attribution: CanSim project, an open, public-data-first cancer foundation-model programme; CanSim page path /terms/uberon."],"provenance":{"editedBy":"OnCo CanSim terms wave (Wikipedia summaries, standards and project pages, GDC and FDA pages, Europe PMC)","editedOn":"2026-09-24","note":"CanSim terms map 1.0.0 (docs/onco/terms.json, generated 2026-09-24), CC BY 4.0, attribution: CanSim project, an open, public-data-first cancer foundation-model programme"},"category":"Anatomy"},"route":"/terms/uberon/","neighbours":{"collection":[{"id":"cellxgene-hca","kind":"collection","name":"CZ CELLxGENE / Human Cell Atlas","route":"/collections/cellxgene-hca/"}],"term":[{"id":"cancer-ai-vocabulary","kind":"term","name":"Cancer AI vocabulary (CanSim terms map)","route":"/terms/cancer-ai-vocabulary/"},{"id":"hpo","kind":"term","name":"Human Phenotype Ontology (HPO)","route":"/terms/hpo/"},{"id":"mondo","kind":"term","name":"Mondo disease ontology","route":"/terms/mondo/"},{"id":"single-cell-rna-seq","kind":"term","name":"Single-cell RNA sequencing (scRNA-seq, 10x Chromium)","route":"/terms/single-cell-rna-seq/"}]}}