# OnCo record cancer-ai-vocabulary (term). Data CC BY-NC 4.0, attribute "Data from OnCo (onco.cc)". Whole corpus: https://onco.cc/api/v1/onco.nt
@prefix schema: <https://schema.org/> .
@prefix onco: <https://onco.cc/ns#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

<https://onco.cc/terms/cancer-ai-vocabulary/>
  a schema:DefinedTerm ;
  onco:kind "term" ;
  schema:identifier "cancer-ai-vocabulary" ;
  schema:name "Cancer AI vocabulary (CanSim terms map)"@en ;
  schema:alternateName "cancer AI vocabulary"@en, "CanSim terms map"@en, "CanSim terms"@en, "methods and models glossary"@en ;
  schema:description "A hub for the vocabulary of cancer AI: the assays and cohorts models train on, the machine-learning and statistics terms in their papers, the standards their data must follow and the licences that govern reuse."@en ;
  schema:url <https://onco.cc/terms/cancer-ai-vocabulary/> ;
  schema:dateModified "2026-09-24"^^xsd:date ;
  onco:tag "cansim-terms", "hub" ;
  onco:related <https://onco.cc/ideas/idea-multimodal-foundation-model/>, <https://onco.cc/ideas/idea-data-open-cell-foundation-model/>, <https://onco.cc/collections/tcga-gdc/>, <https://onco.cc/collections/cptac/>, <https://onco.cc/collections/depmap/>, <https://onco.cc/collections/cellxgene-hca/> ;
  onco:technologies <https://onco.cc/technologies/pathology-foundation-model/>, <https://onco.cc/technologies/ai-compute-platforms/>, <https://onco.cc/technologies/rna-seq/>, <https://onco.cc/technologies/single-cell-spatial/>, <https://onco.cc/technologies/digital-pathology-ai/> ;
  onco:terms <https://onco.cc/terms/tumour-board/>, <https://onco.cc/terms/grade-vs-stage/>, <https://onco.cc/terms/tumour-purity/>, <https://onco.cc/terms/cell-composition-confound/>, <https://onco.cc/terms/intra-tumour-heterogeneity/>, <https://onco.cc/terms/tumour-evolution/>, <https://onco.cc/terms/censoring-and-events/>, <https://onco.cc/terms/prognosis-risk-percentile/>, <https://onco.cc/terms/clinical-covariates/>, <https://onco.cc/terms/endocrine-therapy-resistance/>, <https://onco.cc/terms/immunotherapy-response/>, <https://onco.cc/terms/tertiary-lymphoid-structures/>, <https://onco.cc/terms/pharmacogenomics-term/>, <https://onco.cc/terms/drug-response-sensitivity/>, <https://onco.cc/terms/cell-lines-as-proxy/>, <https://onco.cc/terms/co-amplification/>, <https://onco.cc/terms/copy-number-variation-term/>, <https://onco.cc/terms/cancer-drivers-vs-actionable/>, <https://onco.cc/terms/mrna-protein-concordance/>, <https://onco.cc/terms/post-transcriptional-regulation-term/>, <https://onco.cc/terms/pathway-activation-state/>, <https://onco.cc/terms/gene-co-expression/>, <https://onco.cc/terms/organ-of-origin-signal/>, <https://onco.cc/terms/spatial-autocorrelation/>, <https://onco.cc/terms/variant-effect-prediction/>, <https://onco.cc/terms/bulk-rna-seq/>, <https://onco.cc/terms/tpm-fpkm-counts/>, <https://onco.cc/terms/star-salmon/>, <https://onco.cc/terms/variant-calling/>, <https://onco.cc/terms/somatic-mutations-wxs-wgs/>, <https://onco.cc/terms/targeted-panel-sequencing/>, <https://onco.cc/terms/gistic/>, <https://onco.cc/terms/mutsig/>, <https://onco.cc/terms/batch-effects/>, <https://onco.cc/terms/gsea/>, <https://onco.cc/terms/single-cell-rna-seq/>, <https://onco.cc/terms/spatial-transcriptomics-platforms/>, <https://onco.cc/terms/h-and-e-staining/>, <https://onco.cc/terms/digital-pathology-wsi/>, <https://onco.cc/terms/tile-patch-encoding/>, <https://onco.cc/terms/magnification/>, <https://onco.cc/terms/methylation-arrays/>, <https://onco.cc/terms/microarray-expression/>, <https://onco.cc/terms/rppa/>, <https://onco.cc/terms/mass-spec-proteome/>, <https://onco.cc/terms/ehr-text-pathology-reports/>, <https://onco.cc/terms/radiology-imaging-modality/>, <https://onco.cc/terms/os-pfs-time-event/>, <https://onco.cc/terms/controlled-access-data/>, <https://onco.cc/terms/tcga-tiers/>, <https://onco.cc/terms/data-use-agreements/>, <https://onco.cc/terms/samd/>, <https://onco.cc/terms/research-use-only/>, <https://onco.cc/terms/analytical-vs-clinical-validation/>, <https://onco.cc/terms/hgnc-symbol/>, <https://onco.cc/terms/ensembl-gene-id/>, <https://onco.cc/terms/genome-builds/>, <https://onco.cc/terms/hgvs/>, <https://onco.cc/terms/icd-o-3/>, <https://onco.cc/terms/oncotree-term/>, <https://onco.cc/terms/ncit/>, <https://onco.cc/terms/mondo/>, <https://onco.cc/terms/hpo/>, <https://onco.cc/terms/uberon/>, <https://onco.cc/terms/units-ontology/>, <https://onco.cc/terms/rxnorm/>, <https://onco.cc/terms/ajcc-stage/>, <https://onco.cc/terms/tcga-barcode/>, <https://onco.cc/terms/provenance-fields/>, <https://onco.cc/terms/desmoplastic-stroma-rich/>, <https://onco.cc/terms/foundation-model/>, <https://onco.cc/terms/self-supervised-pretraining/>, <https://onco.cc/terms/masked-modelling/>, <https://onco.cc/terms/contrastive-learning/>, <https://onco.cc/terms/transformer-architecture/>, <https://onco.cc/terms/tokenisation/>, <https://onco.cc/terms/embedding/>, <https://onco.cc/terms/fine-tuning-vs-frozen/>, <https://onco.cc/terms/linear-probe/>, <https://onco.cc/terms/transfer-learning/>, <https://onco.cc/terms/zero-shot/>, <https://onco.cc/terms/autoregressive-modelling/>, <https://onco.cc/terms/multimodal-fusion/>, <https://onco.cc/terms/abmil/>, <https://onco.cc/terms/pathology-foundation-models/>, <https://onco.cc/terms/single-cell-foundation-models/>, <https://onco.cc/terms/genomic-and-protein-language-models/>, <https://onco.cc/terms/spagcn/>, <https://onco.cc/terms/virtual-cell-models/>, <https://onco.cc/terms/drug-response-splits/>, <https://onco.cc/terms/drug-response-baselines/>, <https://onco.cc/terms/domain-adaptation/>, <https://onco.cc/terms/mechanism-of-action-recovery/>, <https://onco.cc/terms/cross-validation/>, <https://onco.cc/terms/train-test-discipline/>, <https://onco.cc/terms/data-leakage/>, <https://onco.cc/terms/external-validation/>, <https://onco.cc/terms/concordance-index/>, <https://onco.cc/terms/calibration/>, <https://onco.cc/terms/roc-auc/>, <https://onco.cc/terms/accuracy-f1/>, <https://onco.cc/terms/time-dependent-auc/>, <https://onco.cc/terms/bootstrap/>, <https://onco.cc/terms/permutation-test/>, <https://onco.cc/terms/spearman-correlation/>, <https://onco.cc/terms/logistic-regression-term/>, <https://onco.cc/terms/ridge-regression/>, <https://onco.cc/terms/pca/>, <https://onco.cc/terms/quantile-normalisation/>, <https://onco.cc/terms/cross-entropy-mse/>, <https://onco.cc/terms/ablation-study/>, <https://onco.cc/terms/ood-detection/>, <https://onco.cc/terms/uncertainty-quantification/>, <https://onco.cc/terms/conformal-prediction/>, <https://onco.cc/terms/model-card/>, <https://onco.cc/terms/leaderboard-benchmark/>, <https://onco.cc/terms/reproducibility/>, <https://onco.cc/terms/pre-registered-experiment/>, <https://onco.cc/terms/open-weights/>, <https://onco.cc/terms/open-licences/>, <https://onco.cc/terms/hugging-face-hub/>, <https://onco.cc/terms/zenodo-doi/>, <https://onco.cc/terms/citation-cff/>, <https://onco.cc/terms/anndata-h5ad/>, <https://onco.cc/terms/hdf5-zarr-parquet/>, <https://onco.cc/terms/duckdb-catalog/>, <https://onco.cc/terms/mixed-precision-gpu/>, <https://onco.cc/terms/local-llm-reasoning-layer/> .