benchmark
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GEARS and perturbation prediction benchmarks GEARS is a graph model predicting the effect of gene knockouts; the perturbation benchmarks around it showed how hard the problem is. | none | virtual-cell | |||
Pathology AI benchmarks (CAMELYON, PANDA, TCGA slide tasks) Grand Challenge / Radboud UMC and partners Pathology AI benchmarks are the open challenge datasets on which every pathology model is scored: CAMELYON16 and 17 for lymph node metastasis detection, PANDA for prostate grading with 11,000 biopsies, and TCGA slide-level tasks used to compare foundation models. Licences are mostly CC BY-NC-SA or set per challenge. | none | none | data |
