OnCo

The brain barrier

The brain's vessels are sealed tight and fitted with pumps that eject most drugs. Cancer cells that squeeze through recruit astrocytes to feed and shield them. Brain-penetrant pills, focused ultrasound and radiosurgery are the answers so far.

Diagram

Pick a product above a diagram to see the nodes it hits and the escape routes below the block. Hover or tap any node or arrow for what it is; every node opens its target, glossary entry or the pathway page. Violet boxes are druggable targets.

Light up a product:+25 more via the Connected tab
CTC arrest at capillary activates Extravasation (cathepsin S)BBB: tight junctions, pericytes inhibits Extravasation (cathepsin S)Extravasation (cathepsin S) activates Vascular co-option (L1CAM)Vascular co-option (L1CAM) activates Brain metastasisAstrocytes: Cx43, cGAMP activates Brain metastasisBrain metastasis activates Astrocytes: Cx43, cGAMPP-gp / BCRP efflux activates Drugs excludedBBB: tight junctions, pericytes activates Drugs excludedDrugs excluded activates Brain metastasisBrain-penetrant TKIs, FUS inhibits Brain metastasisBrain-penetrant TKIs, FUS inhibits P-gp / BCRP effluxCTC arrest at capillaryCTC arrest at capillaryBBB: tight junctions, pericytesBBB: tight junctions, per…P-gp / BCRP effluxP-gp / BCRP effluxExtravasation (cathepsin S)Extravasation (cathepsin …Vascular co-option (L1CAM)Vascular co-option (L1CAM)Astrocytes: Cx43, cGAMPAstrocytes: Cx43, cGAMPBrain metastasis: A receptor that is either mutated in some lung cancers or amplified as an escape route when other lung cancer drugs fail.Brain metastasisDrugs excludedDrugs excludedBrain-penetrant TKIs, FUS: A growth-signal receptor. Some cancers make far too much of it, and drugs that block it or use it as a docking site have transformed those cancers.Brain-penetrant TKIs, FUSactivatesinhibitsdruggable target (click)hit by selected productescape route
The blood-brain barrier & brain metastasisThe brain's blood vessels are sealed tight and fitted with pumps that eject most drugs. That protects the brain from poisons but also from chemotherapy and antibodies. Cancer cells that do squeeze through recruit the brain's own support cells, astrocytes, to feed and shield them.

A gated city with customs officers who throw out most goods (efflux pumps). Smugglers who get in bribe the local guards (astrocytes) to feed them. Drugs that work here are either small enough to slip past customs or arrive by a special convoy (focused ultrasound, intrathecal delivery).

What happens

In plain words, then the glossary entries the stage rests on. Chapter 7, Invasion and metastasis: Metastasis causes about nine in ten cancer deaths, and no approved drug targets it directly.

The brain's vessels are sealed tight and fitted with pumps that eject most drugs. Cancer cells that squeeze through recruit astrocytes to feed and shield them. Brain-penetrant pills, focused ultrasound and radiosurgery are the answers so far.

The blood-brain barrier & brain metastasis. The brain's blood vessels are sealed tight and fitted with pumps that eject most drugs. That protects the brain from poisons but also from chemotherapy and antibodies. Cancer cells that do squeeze through recruit the brain's own support cells, astrocytes, to feed and shield them.

The molecular players

The proteins and genes at this stage, with their role and how many products act on each. Listed players come from the atlas; drawn players sit as nodes in the diagrams above.

  • A growth receptor that is mutated in some lung cancers and overproduced in others; the first great success of targeted pills.

  • A growth-signal receptor. Some cancers make far too much of it, and drugs that block it or use it as a docking site have transformed those cancers.

  • ALK is a gene fusion driver in about 4 to 5% of non-small-cell lung cancers that responds to a succession of ALK inhibitor pills. Lorlatinib kept about 60% of patients progression-free at five years, alectinib is approved after surgery, and neladalkib targets compound resistance mutations.

Where medicines act

Products grouped by the node they hit, most advanced first, with the cancers an approved product is linked to. Pick one above the diagram to see it light up.

How tumours escape

Records tied to this stage that describe resistance, evasion or tolerance. The resistance atlas lists the routes class by class.

Ideas that attack the escape

Measured by

Biomarkers, tests and assays in the corpus that read this stage in a patient.

Open questions

What is not known at this stage: the atlas's own questions, the bottlenecks it bears on, and the ideas in the corpus that try to answer them.

  • Why do some large molecules (T-DXd) work in the brain when the barrier should exclude them?
  • Can focused ultrasound deliver antibodies and cell therapies to brain tumours routinely?
Ideas 26 linked ideas

16 more ideas are linked to this stage's pathways, targets and terms; see the rankings →

Key evidence

Papers in the corpus tied to this stage's pathways, targets and terms, newest first.

12 more papers in the key-papers index →

How this page is built: the stage is one entry in a curated atlas (src/data/mechanics-atlas.ts). Players, medicines, escape routes, tests, ideas and papers are resolved from the knowledge graph at build time through the stage's pathways, targets and terms, so every item here has its own page and sources. Where a section is missing, the corpus has no record tied to the stage yet. Nothing here is medical advice; see about and methodology. Stage 7.7 of 56.